STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF56124.1PFAM: FAD dependent oxidoreductase; KEGG: ppg:PputGB1_3518 FAD dependent oxidoreductase. (430 aa)    
Predicted Functional Partners:
AEF54348.1
KEGG: pmy:Pmen_4129 sarcosine oxidase alpha subunit family protein; TIGRFAM: Sarcosine oxidase, alpha subunit, heterotetrameric; PFAM: Glycine cleavage T-protein, N-terminal; HI0933-like protein; Glycine cleavage T-protein, C-terminal barrel; Belongs to the GcvT family.
 
 
 0.897
AEF56123.1
PFAM: Endoribonuclease L-PSP; KEGG: swi:Swit_1591 endoribonuclease L-PSP.
    0.874
AEF56122.1
PFAM: Ornithine cyclodeaminase/mu-crystallin; KEGG: vvy:VV1563 ornithine cyclodeaminase.
 
  
 0.849
AEF56125.1
PFAM: Amino acid permease-associated region; KEGG: cps:CPS_2040 amino acid permease family protein.
 
  
 0.728
AEF54527.1
KEGG: pde:Pden_4954 putative acetyltransferase protein.
  
     0.680
AEF54526.1
PFAM: GCN5-related N-acetyltransferase; KEGG: bgl:bglu_2g10320 GCN5-related N-acetyltransferase.
  
     0.677
AEF54529.1
KEGG: bcm:Bcenmc03_6279 haloacid dehalogenase, type II; TIGRFAM: Haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2; PFAM: Haloacid dehalogenase-like hydrolase.
 
     0.667
AEF53730.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.614
AEF54531.1
ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: pfs:PFLU4047 putative ABC transporter solute binding protein.
  
     0.588
AEF54990.1
Thiamine-phosphate pyrophosphorylase; TIGRFAM: Thiamine monophosphate synthase; KEGG: fbl:Fbal_2033 thiamine-phosphate diphosphorylase; PFAM: Phosphomethylpyrimidine kinase type-1; Thiamine monophosphate synthase.
  
  
 0.562
Your Current Organism:
Marinomonas posidonica
NCBI taxonomy Id: 491952
Other names: M. posidonica IVIA-Po-181, Marinomonas posidonica IVIA-Po-181, Marinomonas posidonica str. IVIA-Po-181, Marinomonas posidonica strain IVIA-Po-181, Marinomonas sp. IVIA-Po-181
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