STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureCPFAM: Amidohydrolase 1; Urease alpha-subunit, N-terminal; TIGRFAM: Urease, alpha subunit; HAMAP: Urease subunit alpha; KEGG: amc:MADE_00889 urease subunit alpha. (568 aa)    
Predicted Functional Partners:
ureB
PFAM: Urease, beta subunit; TIGRFAM: Urease, beta subunit; HAMAP: Urease subunit beta; KEGG: ttu:TERTU_4207 urease, beta subunit; Belongs to the urease beta subunit family.
 0.999
ureA
PFAM: Urease, alpha/gamma subunit; TIGRFAM: Urease, alpha/gamma subunit; HAMAP: Urease, gamma subunit; KEGG: pin:Ping_2992 urease subunit gamma; Belongs to the urease gamma subunit family.
 0.999
ureF
Urease accessory protein ureF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.995
ureE
Urease accessory protein ureE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
  
 0.989
ureG
Urease accessory protein ureG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
  
 0.983
ureD
Urease accessory protein ureD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
  
 0.962
AEF56338.1
Urea carboxylase; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; TIGRFAM: Urea carboxylase; Allophanate hydrolase subunit 2; KEGG: cja:CJA_2723 UreA amidolyase homolog; PFAM: Allophanate hydrolase subunit 2; Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Allophanate hydrolase subunit 1; Biotin/lipoyl attachment.
    
 0.938
AEF56339.1
TIGRFAM: Allophanate hydrolase; KEGG: tgr:Tgr7_3090 allophanate hydrolase; PFAM: Amidase.
     
  0.900
AEF56174.1
SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtD; KEGG: pin:Ping_2989 ABC transporter ATP-binding protein; PFAM: ABC transporter-like.
     
 0.762
AEF56176.1
Urea ABC transporter, permease protein UrtB; KEGG: amc:MADE_00882 branched-chain amino acid ABC-type transport system, permease component; TIGRFAM: ABC transporter, urea, permease protein, UrtB; PFAM: Bacterial inner-membrane translocator.
     
 0.753
Your Current Organism:
Marinomonas posidonica
NCBI taxonomy Id: 491952
Other names: M. posidonica IVIA-Po-181, Marinomonas posidonica IVIA-Po-181, Marinomonas posidonica str. IVIA-Po-181, Marinomonas posidonica strain IVIA-Po-181, Marinomonas sp. IVIA-Po-181
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