STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF56226.1PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: mes:Meso_0837 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (314 aa)    
Predicted Functional Partners:
AEF55254.1
PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: sbn:Sbal195_2966 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.704
AEF54161.1
PFAM: HTH transcriptional regulator, LysR; KEGG: son:SO_0997 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.703
AEF53124.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: svo:SVI_2630 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.684
AEF55382.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: hel:HELO_3350 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.682
AEF55470.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: hch:HCH_06745 transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.668
AEF54444.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pat:Patl_0997 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.656
AEF55259.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spl:Spea_3197 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.654
AEF53104.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.653
AEF56009.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: azl:AZL_a09680 transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.651
AEF55149.1
Transcriptional regulator, LysR family; KEGG: aha:AHA_1147 DNA-binding transcriptional activator GcvA; manually curated; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; Belongs to the LysR transcriptional regulatory family.
  
     0.649
Your Current Organism:
Marinomonas posidonica
NCBI taxonomy Id: 491952
Other names: M. posidonica IVIA-Po-181, Marinomonas posidonica IVIA-Po-181, Marinomonas posidonica str. IVIA-Po-181, Marinomonas posidonica strain IVIA-Po-181, Marinomonas sp. IVIA-Po-181
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