STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF56231.1ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: mes:Meso_0840 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (400 aa)    
Predicted Functional Partners:
AEF56232.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: mes:Meso_0839 ABC transporter related; SMART: ATPase, AAA+ type, core.
 0.996
AEF56233.1
KEGG: mes:Meso_0838 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor.
   
 0.905
xylG
D-xylose ABC transporter, ATPase subunit; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 0.810
AEF56230.1
Fumarylacetoacetate (FAA) hydrolase; PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: mes:Meso_0841 hypothetical protein.
 
     0.810
AEF55062.1
KEGG: ppr:PBPRA0462 D-xylose transporter subunit XylF; TIGRFAM: D-xylose ABC transporter, substrate-binding protein; PFAM: Periplasmic binding protein/LacI transcriptional regulator.
   
 0.783
AEF56228.1
KEGG: mes:Meso_0842 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
       0.768
AEF56229.1
KEGG: pfs:PFLU2376 putative short-chain dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR.
       0.768
AEF53130.1
PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: pst:PSPTO_2399 ribose ABC transporter, periplasmic ribose-binding protein.
 
 
 0.672
AEF54071.1
PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: ara:Arad_8181 ribose ABC transporter.
 
 0.665
AEF56292.1
PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: tau:Tola_0052 periplasmic binding protein/LacI transcriptional regulator.
 
 
 0.662
Your Current Organism:
Marinomonas posidonica
NCBI taxonomy Id: 491952
Other names: M. posidonica IVIA-Po-181, Marinomonas posidonica IVIA-Po-181, Marinomonas posidonica str. IVIA-Po-181, Marinomonas posidonica strain IVIA-Po-181, Marinomonas sp. IVIA-Po-181
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