STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK66802.1Phospholipid transport system transporter-binding protein. (97 aa)    
Predicted Functional Partners:
SDK66820.1
Phospholipid transport system substrate-binding protein.
  
 
 0.968
SDK66846.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
 0.937
SDK66884.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 0.927
SDK66863.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
 0.906
SDK66760.1
ABC-2 type transport system permease protein.
       0.620
SDK66782.1
ABC-2 type transport system ATP-binding protein.
       0.620
SDK66739.1
Transcriptional regulator, BolA protein family; Belongs to the BolA/IbaG family.
       0.497
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.454
hisG
ATP phosphoribosyltransferase (homohexameric); Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.
       0.435
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
  
    0.411
Your Current Organism:
Methylophilus rhizosphaerae
NCBI taxonomy Id: 492660
Other names: KACC 13099, M. rhizosphaerae, Methylophilus rhizosphaerae Madhaiyan et al. 2009, Methylophilus sp. CBMB127, Methylophilus sp. CBMB145, NCCB 100233, strain CBMB127
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.