STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK70088.1Hypothetical protein. (203 aa)    
Predicted Functional Partners:
SDK70046.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.773
SDK70063.1
Hypothetical protein.
       0.773
SDK70103.1
Hypothetical protein.
       0.773
SDK70127.1
Type IV pilus assembly protein PilC.
       0.773
SDK70147.1
General secretion pathway protein E/type IV pilus assembly protein PilB; Manually curated.
       0.773
SDK70170.1
Hypothetical protein.
       0.773
SDK70188.1
General secretion pathway protein D; Belongs to the bacterial secretin family.
       0.773
SDK70026.1
Molybdopterin or thiamine biosynthesis adenylyltransferase.
       0.741
SDK70206.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.495
Your Current Organism:
Methylophilus rhizosphaerae
NCBI taxonomy Id: 492660
Other names: KACC 13099, M. rhizosphaerae, Methylophilus rhizosphaerae Madhaiyan et al. 2009, Methylophilus sp. CBMB127, Methylophilus sp. CBMB145, NCCB 100233, strain CBMB127
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.