STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHK47663.1In Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation; interacts with DnaN and DnaA; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa)    
Predicted Functional Partners:
AHK47661.1
DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.860
AHK47662.1
Stage 0 sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.819
AHK47660.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.776
AHK47659.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.741
AHK47665.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.712
AHK47631.1
DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.694
AHK47658.1
Thymidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.686
AHK47664.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.681
AHK47666.1
16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.676
AHK48099.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.668
Your Current Organism:
Bacillus velezensis TrigoCor1448
NCBI taxonomy Id: 1449088
Other names: B. velezensis TrigoCor1448, Bacillus amyloliquefaciens subsp. plantarum TrigoCor1448, Bacillus methylotrophicus TrigoCor1448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.