STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHK47766.1Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)    
Predicted Functional Partners:
AHK47764.1
50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.980
AHK47762.1
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.977
AHK47765.1
Preprotein translocase subunit SecY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.976
AHK47757.1
50S ribosomal protein L5; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.973
AHK47760.1
50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.970
AHK47759.1
30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.969
AHK47761.1
50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.969
AHK47771.1
30S ribosomal protein S11; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.968
AHK47763.1
50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.967
AHK47755.1
50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.966
Your Current Organism:
Bacillus velezensis TrigoCor1448
NCBI taxonomy Id: 1449088
Other names: B. velezensis TrigoCor1448, Bacillus amyloliquefaciens subsp. plantarum TrigoCor1448, Bacillus methylotrophicus TrigoCor1448
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.