STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744505_00131Unannotated protein. (94 aa)    
Predicted Functional Partners:
GCA_000744505_05923
Unannotated protein.
  
     0.515
GCA_000744505_00130
Unannotated protein.
       0.495
GCA_000744505_00129
Unannotated protein.
       0.492
GCA_000744505_03619
Unannotated protein.
  
    0.441
GCA_000744505_00127
Unannotated protein.
       0.422
GCA_000744505_00128
Unannotated protein.
       0.422
GCA_000744505_00125
Unannotated protein.
       0.415
GCA_000744505_00126
Unannotated protein.
       0.415
Your Current Organism:
Rhizobium alamii
NCBI taxonomy Id: 492774
Other names: CFBP 7146, LMG 24466, LMG:24466, R. alamii, Rhizobium alamii Berge et al. 2009, strain GBV016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.