STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744505_04273Unannotated protein. (257 aa)    
Predicted Functional Partners:
GCA_000744505_00266
Unannotated protein.
  
 
 0.783
GCA_000744505_03112
Unannotated protein.
  
 
 0.783
GCA_000744505_00539
Unannotated protein.
  
 
 0.780
GCA_000744505_00405
Unannotated protein.
  
 
   0.763
GCA_000744505_03241
Unannotated protein.
    
 0.762
GCA_000744505_03779
Unannotated protein.
    
 0.762
GCA_000744505_06963
Unannotated protein.
   
 
 0.761
GCA_000744505_05225
Unannotated protein.
  
  
 
0.752
GCA_000744505_06969
Unannotated protein.
   
 
 0.750
GCA_000744505_02638
Unannotated protein.
   
   0.744
Your Current Organism:
Rhizobium alamii
NCBI taxonomy Id: 492774
Other names: CFBP 7146, LMG 24466, LMG:24466, R. alamii, Rhizobium alamii Berge et al. 2009, strain GBV016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.