STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744505_05184Unannotated protein. (645 aa)    
Predicted Functional Partners:
GCA_000744505_05186
Unannotated protein.
 
     0.862
GCA_000744505_00963
Unannotated protein.
   
    0.849
GCA_000744505_00909
Unannotated protein.
   
    0.836
GCA_000744505_03041
Unannotated protein.
   
    0.708
GCA_000744505_03477
Unannotated protein.
   
    0.708
GCA_000744505_05185
Unannotated protein.
       0.666
GCA_000744505_05439
Unannotated protein.
   
    0.573
GCA_000744505_05183
Unannotated protein.
       0.539
GCA_000744505_00410
Unannotated protein.
  
    0.471
GCA_000744505_05553
Unannotated protein.
  
    0.471
Your Current Organism:
Rhizobium alamii
NCBI taxonomy Id: 492774
Other names: CFBP 7146, LMG 24466, LMG:24466, R. alamii, Rhizobium alamii Berge et al. 2009, strain GBV016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.