STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBX27221.1Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)    
Predicted Functional Partners:
OBX27219.1
Pkd domain containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.808
OBX27220.1
Cyanophycinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S51 family.
       0.757
OBX27222.1
Cyanophycinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S51 family.
       0.705
OBX27005.1
FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.601
A9996_04375
UDP-2,3-diacylglucosamine hydrolase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.601
OBX27218.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.585
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
  
 0.549
OBX27217.1
Glycan metabolism protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.533
OBX27216.1
SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.527
OBX25981.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.497
Your Current Organism:
Gelidibacter algens
NCBI taxonomy Id: 49280
Other names: ACAM 536, ATCC 700364, DSM 12408, G. algens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.