STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBX26912.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (622 aa)    
Predicted Functional Partners:
OBX26911.1
Laminarinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.660
OBX26909.1
Glucan endo-1,3-beta-D-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.613
OBX26913.1
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.572
OBX26910.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.559
OBX26908.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    
0.520
OBX25681.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.520
OBX26981.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.488
OBX26493.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.478
A9996_02250
LuxR family transcriptional regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.463
OBX26978.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.454
Your Current Organism:
Gelidibacter algens
NCBI taxonomy Id: 49280
Other names: ACAM 536, ATCC 700364, DSM 12408, G. algens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.