STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBX26921.1Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (99 aa)    
Predicted Functional Partners:
OBX26918.1
Gliding motility-associated ABC transporter substrate-binding protein GldG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.747
OBX26919.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.714
OBX26920.1
Gliding motility-associated ABC transporter permease subunit GldF; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.714
OBX27252.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.640
OBX26368.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.570
OBX24999.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.545
OBX26922.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.496
OBX26806.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.457
OBX25944.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.443
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
  0.442
Your Current Organism:
Gelidibacter algens
NCBI taxonomy Id: 49280
Other names: ACAM 536, ATCC 700364, DSM 12408, G. algens
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