OBX26621.1 protein (Gelidibacter algens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

OBX26621.1

ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (590 aa)

Predicted Functional Partners:

A9996_01335

0.856

OBX27252.1

0.790

OBX26683.1

0.739

OBX21312.1

0.735

OBX26168.1

0.719

OBX27253.1

0.601

OBX24918.1

0.601

OBX25421.1

0.563

OBX26610.1

0.553

OBX24917.1

0.540

Your Current Organism:

Gelidibacter algens

NCBI taxonomy Id: 49280
Other names: ACAM 536, ATCC 700364, DSM 12408, G. algens

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A9996_01335	OBX21312.1	A9996_01335	A9996_18240	TetR family transcriptional regulator; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.856
A9996_01335	OBX26621.1	A9996_01335	A9996_03400	TetR family transcriptional regulator; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.856
OBX21312.1	A9996_01335	A9996_18240	A9996_01335	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TetR family transcriptional regulator; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.856
OBX21312.1	OBX24917.1	A9996_18240	A9996_12505	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
OBX21312.1	OBX24918.1	A9996_18240	A9996_12510	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.601
OBX21312.1	OBX25421.1	A9996_18240	A9996_10235	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdenum cofactor biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.506
OBX21312.1	OBX26168.1	A9996_18240	A9996_06490	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.659
OBX21312.1	OBX26610.1	A9996_18240	A9996_03330	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.553
OBX21312.1	OBX26621.1	A9996_18240	A9996_03400	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
OBX21312.1	OBX26683.1	A9996_18240	A9996_03760	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.797
OBX21312.1	OBX27252.1	A9996_18240	A9996_00575	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.790
OBX21312.1	OBX27253.1	A9996_18240	A9996_00580	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.601
OBX24917.1	OBX21312.1	A9996_12505	A9996_18240	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
OBX24917.1	OBX24918.1	A9996_12505	A9996_12510	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OBX24917.1	OBX26621.1	A9996_12505	A9996_03400	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
OBX24917.1	OBX27252.1	A9996_12505	A9996_00575	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.999
OBX24917.1	OBX27253.1	A9996_12505	A9996_00580	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.999
OBX24918.1	OBX21312.1	A9996_12510	A9996_18240	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.601
OBX24918.1	OBX24917.1	A9996_12510	A9996_12505	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OBX24918.1	OBX25421.1	A9996_12510	A9996_10235	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdenum cofactor biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.449