OBX25709.1 protein (Gelidibacter algens) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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[Homology]

Score

OBX25709.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (76 aa)

Predicted Functional Partners:

OBX25686.1

0.861

OBX25688.1

0.850

OBX25687.1

0.813

OBX25689.1

0.708

OBX25690.1

0.687

ctaB

0.563

OBX25919.1

0.560

OBX26331.1

0.518

OBX25685.1

0.502

OBX25683.1

0.500

Your Current Organism:

Gelidibacter algens

NCBI taxonomy Id: 49280
Other names: ACAM 536, ATCC 700364, DSM 12408, G. algens

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OBX25683.1	OBX25685.1	A9996_08825	A9996_08835	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
OBX25683.1	OBX25686.1	A9996_08825	A9996_08845	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.500
OBX25683.1	OBX25687.1	A9996_08825	A9996_08850	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Photosynthetic protein synthase II; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.500
OBX25683.1	OBX25688.1	A9996_08825	A9996_08855	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.500
OBX25683.1	OBX25709.1	A9996_08825	A9996_08840	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.500
OBX25685.1	OBX25683.1	A9996_08835	A9996_08825	Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
OBX25685.1	OBX25686.1	A9996_08835	A9996_08845	Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.500
OBX25685.1	OBX25687.1	A9996_08835	A9996_08850	Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Photosynthetic protein synthase II; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.500
OBX25685.1	OBX25688.1	A9996_08835	A9996_08855	Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.500
OBX25685.1	OBX25709.1	A9996_08835	A9996_08840	Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.502
OBX25686.1	OBX25683.1	A9996_08845	A9996_08825	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.500
OBX25686.1	OBX25685.1	A9996_08845	A9996_08835	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.500
OBX25686.1	OBX25687.1	A9996_08845	A9996_08850	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Photosynthetic protein synthase II; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.929
OBX25686.1	OBX25688.1	A9996_08845	A9996_08855	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.813
OBX25686.1	OBX25689.1	A9996_08845	A9996_08860	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.591
OBX25686.1	OBX25690.1	A9996_08845	A9996_08865	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.785
OBX25686.1	OBX25709.1	A9996_08845	A9996_08840	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.861
OBX25686.1	ctaB	A9996_08845	A9996_08875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.	0.753
OBX25687.1	OBX25683.1	A9996_08850	A9996_08825	Photosynthetic protein synthase II; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.500
OBX25687.1	OBX25685.1	A9996_08850	A9996_08835	Photosynthetic protein synthase II; Derived by automated computational analysis using gene prediction method: Protein Homology.	Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.500