STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBX25399.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (457 aa)    
Predicted Functional Partners:
OBX25398.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.993
OBX24528.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.836
OBX24530.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
0.821
OBX22422.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.810
OBX24534.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
0.809
OBX24744.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.792
OBX24532.1
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.788
OBX26270.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.746
OBX27230.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.730
OBX26521.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.715
Your Current Organism:
Gelidibacter algens
NCBI taxonomy Id: 49280
Other names: ACAM 536, ATCC 700364, DSM 12408, G. algens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.