STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBX25184.1DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)    
Predicted Functional Partners:
OBX25262.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.914
OBX22321.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.905
OBX25009.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.902
OBX25239.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.864
OBX24528.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.818
OBX25455.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.796
OBX26776.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.767
OBX26699.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.726
OBX25008.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.714
OBX24998.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.709
Your Current Organism:
Gelidibacter algens
NCBI taxonomy Id: 49280
Other names: ACAM 536, ATCC 700364, DSM 12408, G. algens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.