Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PGUG_00501 | PGUG_02905 | A5DB46 | A5DI04 | Uncharacterized protein. | Uncharacterized protein. | 0.780 |
PGUG_00501 | PGUG_03558 | A5DB46 | A5DJV7 | Uncharacterized protein. | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.857 |
PGUG_00501 | PGUG_03697 | A5DB46 | A5DK96 | Uncharacterized protein. | Cytochrome c oxidase subunit 6A, mitochondrial. | 0.992 |
PGUG_00501 | PGUG_03701 | A5DB46 | A5DKA0 | Uncharacterized protein. | Uncharacterized protein. | 0.995 |
PGUG_00501 | PGUG_04022 | A5DB46 | A5DL71 | Uncharacterized protein. | Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport. | 0.988 |
PGUG_00501 | PGUG_05919 | A5DB46 | A5H2U1 | Uncharacterized protein. | CYTB_CTER domain-containing protein. | 0.997 |
PGUG_00501 | PGUG_05920 | A5DB46 | A5H2U2 | Uncharacterized protein. | GIY-YIG domain-containing protein. | 0.846 |
PGUG_00501 | RCF1 | A5DB46 | A5DHC2 | Uncharacterized protein. | Respiratory supercomplex factor 1, mitochondrial; Cytochrome c oxidase subunit which plays a role in assembly of respiratory supercomplexes. | 0.650 |
PGUG_02905 | PGUG_00501 | A5DI04 | A5DB46 | Uncharacterized protein. | Uncharacterized protein. | 0.780 |
PGUG_02905 | PGUG_03558 | A5DI04 | A5DJV7 | Uncharacterized protein. | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.745 |
PGUG_02905 | PGUG_03697 | A5DI04 | A5DK96 | Uncharacterized protein. | Cytochrome c oxidase subunit 6A, mitochondrial. | 0.977 |
PGUG_02905 | PGUG_03701 | A5DI04 | A5DKA0 | Uncharacterized protein. | Uncharacterized protein. | 0.979 |
PGUG_02905 | PGUG_04022 | A5DI04 | A5DL71 | Uncharacterized protein. | Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport. | 0.542 |
PGUG_02905 | PGUG_04481 | A5DI04 | A5DMI0 | Uncharacterized protein. | Uncharacterized protein; Belongs to the peptidase M16 family. | 0.780 |
PGUG_02905 | PGUG_05919 | A5DI04 | A5H2U1 | Uncharacterized protein. | CYTB_CTER domain-containing protein. | 0.856 |
PGUG_02905 | PGUG_05920 | A5DI04 | A5H2U2 | Uncharacterized protein. | GIY-YIG domain-containing protein. | 0.931 |
PGUG_02905 | RCF1 | A5DI04 | A5DHC2 | Uncharacterized protein. | Respiratory supercomplex factor 1, mitochondrial; Cytochrome c oxidase subunit which plays a role in assembly of respiratory supercomplexes. | 0.715 |
PGUG_03318 | RCF1 | A5DJ67 | A5DHC2 | Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer; Belongs to the SDHAF2 family. | Respiratory supercomplex factor 1, mitochondrial; Cytochrome c oxidase subunit which plays a role in assembly of respiratory supercomplexes. | 0.590 |
PGUG_03558 | PGUG_00501 | A5DJV7 | A5DB46 | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | Uncharacterized protein. | 0.857 |
PGUG_03558 | PGUG_02905 | A5DJV7 | A5DI04 | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | Uncharacterized protein. | 0.745 |
page 1 of 5