Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
BWD07_06370Hypothetical protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)    
Predicted Functional Partners:
OSI11804.1
RDD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.660
OSI12240.1
Heme oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.636
OSI12319.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.525
OSI12383.1
Azurin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.521
OSI12235.1
Phosphoribosylglycinamide formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.512
OSI11994.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.502
OSI10537.1
NnrS protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.502
sirB2
SirB family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.490
OSI12923.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.465
OSI12099.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.464
Your Current Organism:
Neisseria canis
NCBI taxonomy Id: 493
Other names: ATCC 14687, CIP 103347, LMG 8383, LMG:8383, N. canis, NCTC 10296, strain H 6
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