STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSI12206.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)    
Predicted Functional Partners:
metN_2
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.922
OSI12047.1
Dialkylrecorsinol condensing enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.776
OSI12049.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.776
OSI12079.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.775
OSI12048.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.774
OSI13454.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.722
OSI12057.1
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.655
OSI12036.1
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.584
OSI12051.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.523
prmB
Ribosomal protein L3 N(5)-glutamine methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.
       0.505
Your Current Organism:
Neisseria canis
NCBI taxonomy Id: 493
Other names: ATCC 14687, CIP 103347, LMG 8383, LMG:8383, N. canis, NCTC 10296, strain H 6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.