Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSI12007.1Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)    
Predicted Functional Partners:
OSI12006.1
GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.953
OSI12005.1
Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.949
OSI12008.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.902
OSI12013.1
23S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.747
pilK
Pilus assembly protein PilX; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.564
OSI12099.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
OSI13243.1
Pilin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.512
birA
Bifunctional biotin--[acetyl-CoA-carboxylase] ligase/pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
  
     0.499
OSI12474.1
Osmoprotectant transport activator ProQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.490
OSI12882.1
Type IV pilus biogenesis/stability protein PilW; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.472
Your Current Organism:
Neisseria canis
NCBI taxonomy Id: 493
Other names: ATCC 14687, CIP 103347, LMG 8383, LMG:8383, N. canis, NCTC 10296, strain H 6
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