Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mlaAABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)    
Predicted Functional Partners:
mlaC
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.971
mlaD
Outer membrane lipid asymmetry maintenance protein MlaD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.941
mlaE
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.851
OSI11671.1
Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.848
OSI13377.1
Toluene tolerance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.812
porB_2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.801
porB_1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.742
OSI11675.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.679
OSI12064.1
Phage repressor protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.480
comL
Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
  
 0.477
Your Current Organism:
Neisseria canis
NCBI taxonomy Id: 493
Other names: ATCC 14687, CIP 103347, LMG 8383, LMG:8383, N. canis, NCTC 10296, strain H 6
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