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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comMATP-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (498 aa)    
Predicted Functional Partners:
yqiC
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.820
smf
DNA protecting protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.814
OSI11029.1
Competence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.774
OSI12592.1
YraN family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family.
 
    0.721
comA
DNA internalization-related competence protein ComEC/Rec2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.597
OSI10825.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.596
nudG
NTP pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.529
OSI10815.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.506
acpS
holo-ACP synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
       0.502
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
  
   
 0.466
Your Current Organism:
Neisseria canis
NCBI taxonomy Id: 493
Other names: ATCC 14687, CIP 103347, LMG 8383, LMG:8383, N. canis, NCTC 10296, strain H 6
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