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YGL052W protein (Saccharomyces cerevisiae) - STRING interaction network
"YGL052W" - Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data in Saccharomyces cerevisiae
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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Experiments
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[Homology]
Score
YGL052WDubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MST27 (101 aa)    
Predicted Functional Partners:
PRM8
Pheromone-regulated protein with 2 predicted transmembrane segments and an FF sequence, a motif involved in COPII binding; forms a complex with Prp9p in the ER; member of DUP240 gene family; May be involved in endoplasmic reticulum exit trafficking of proteins (237 aa)
     
   
  0.981
MST27
Putative integral membrane protein, involved in vesicle formation; forms complex with Mst28p; member of DUP240 gene family; binds COPI and COPII vesicles; Involved in protein trafficking vesicle formation, probably by stabilizing of coatomer at the Golgi membrane and thus allowing the efficient formation of COPI coated vesicles (234 aa)
     
   
  0.942
MST28
Putative integral membrane protein, involved in vesicle formation; forms complex with Mst27p; member of DUP240 gene family; binds COPI and COPII vesicles; Involved in protein trafficking vesicle formation, probably by stabilizing of coatomer at the Golgi membrane and thus allowing the efficient formation of COPI coated vesicles (234 aa)
     
   
  0.774
YGL102C
Dubious open reading frame unlikely to encode a functional protein; overlaps 3’ end of essential RPL28 gene encoding a large subunit ribosomal protein (142 aa)
           
  0.768
YAR023C
Putative integral membrane protein, member of DUP240 gene family (179 aa)
           
  0.699
PRM9
Pheromone-regulated protein with 3 predicted transmembrane segments and an FF sequence, a motif involved in COPII binding; member of DUP240 gene family; May be involved in endoplasmic reticulum exit trafficking of proteins (298 aa)
           
  0.697
YHR212W-A
Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching (67 aa)
           
  0.679
YAR030C
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YAR029W and the verified gene PRM9 (113 aa)
           
  0.639
YAR047C
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data (106 aa)
           
  0.626
YCR007C
Putative integral membrane protein, member of DUP240 gene family; YCR007C is not an essential gene (239 aa)
           
  0.623
Your Current Organism:
Saccharomyces cerevisiae
NCBI taxonomy Id: 4932
Other names: Candida robusta, Pachytichospora, S. cerevisiae, Saccharomyces, Saccharomyces capensis, Saccharomyces cerevisiae, Saccharomyces italicus, Saccharomyces oviformis, Saccharomyces uvarum var. melibiosus, lager beer yeast, yeast
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