Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGC1 | YGR039W | YPR021C | YGR039W | Solute carrier family 25 (mitochondrial aspartate/glutamate transporter), member 12/13; Mitochondrial amino acid transporter; acts both as a glutamate uniporter and as an aspartate-glutamate exchanger; involved in nitrogen metabolism and nitrogen compound biosynthesis; human homolog SLC25A13 complements yeast null mutant | Uncharacterized protein YGR039W; Putative protein of unknown function; conserved among S. cerevisiae strains; YGR039W is not an essential gene | 0.678 |
| NUP57 | YGR039W | YGR119C | YGR039W | FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of the nuclear pore complex (NPC) permeability barrier; found in stable complex with Nic96p and two other FG-nucleoproteins (Nsp1p and Nup49p) | Uncharacterized protein YGR039W; Putative protein of unknown function; conserved among S. cerevisiae strains; YGR039W is not an essential gene | 0.744 |
| RPL43B | YGR039W | YJR094W-A | YGR039W | Ribosomal 60S subunit protein L43B; homologous to mammalian ribosomal protein L37A, no bacterial homolog; RPL43B has a paralog, RPL43A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress | Uncharacterized protein YGR039W; Putative protein of unknown function; conserved among S. cerevisiae strains; YGR039W is not an essential gene | 0.450 |
| YGR039W | AGC1 | YGR039W | YPR021C | Uncharacterized protein YGR039W; Putative protein of unknown function; conserved among S. cerevisiae strains; YGR039W is not an essential gene | Solute carrier family 25 (mitochondrial aspartate/glutamate transporter), member 12/13; Mitochondrial amino acid transporter; acts both as a glutamate uniporter and as an aspartate-glutamate exchanger; involved in nitrogen metabolism and nitrogen compound biosynthesis; human homolog SLC25A13 complements yeast null mutant | 0.678 |
| YGR039W | NUP57 | YGR039W | YGR119C | Uncharacterized protein YGR039W; Putative protein of unknown function; conserved among S. cerevisiae strains; YGR039W is not an essential gene | FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of the nuclear pore complex (NPC) permeability barrier; found in stable complex with Nic96p and two other FG-nucleoproteins (Nsp1p and Nup49p) | 0.744 |
| YGR039W | RPL43B | YGR039W | YJR094W-A | Uncharacterized protein YGR039W; Putative protein of unknown function; conserved among S. cerevisiae strains; YGR039W is not an essential gene | Ribosomal 60S subunit protein L43B; homologous to mammalian ribosomal protein L37A, no bacterial homolog; RPL43B has a paralog, RPL43A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress | 0.450 |
