STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL25Mitochondrial 54s ribosomal protein yml25; Mitochondrial ribosomal protein of the large subunit; mutation confers increased replicative lifespan (157 aa)    
Predicted Functional Partners:
MRPL9
Mitochondrial 54s ribosomal protein yml9; Mitochondrial ribosomal protein of the large subunit
   
   0.986
MRPL40
Mitochondrial 54s ribosomal protein yml40; Mitochondrial ribosomal protein of the large subunit
   
 
 0.977
IMG1
54S ribosomal protein IMG1, mitochondrial; Mitochondrial ribosomal protein of the large subunit; required for respiration and for maintenance of the mitochondrial genome
   
   0.976
MRPS8
Mitochondrial 37s ribosomal protein mrps8; Mitochondrial ribosomal protein of the small subunit
   
 
 0.975
MRPL24
Mitochondrial 54s ribosomal protein yml24/yml14; Mitochondrial ribosomal protein of the large subunit; two mitochondrial ribosomal proteins, YmL14 and YmL24, have been assigned to the same gene
   
 
 0.968
MRPL35
Mitochondrial 54s ribosomal protein yml35; Mitochondrial ribosomal protein of the large subunit; Belongs to the phosphatidylethanolamine-binding protein family. Mitochondrion-specific ribosomal protein mL38 subfamily
   
 
 0.967
MRPS16
Mitochondrial 37s ribosomal protein mrps16; Mitochondrial ribosomal protein of the small subunit
   
 
 0.960
IMG2
54S ribosomal protein IMG2, mitochondrial; Mitochondrial ribosomal protein of the large subunit; conserved in metazoa, with similarity to human mitochondrial ribosomal protein MRPL49
   
   0.956
MRPL32
Mitochondrial 54s ribosomal protein yml32; Mitochondrial ribosomal protein of the large subunit; protein abundance increases in response to DNA replication stress
   
 
 0.955
MRPL36
Mitochondrial 54s ribosomal protein yml36; Mitochondrial ribosomal protein of the large subunit; overproduction suppresses mutations in the COX2 leader peptide-encoding region
   
   0.952
Your Current Organism:
Saccharomyces cerevisiae
NCBI taxonomy Id: 4932
Other names: ATCC 18824, Candida robusta, NRRL Y-12632, S. cerevisiae, Saccharomyces capensis, Saccharomyces italicus, Saccharomyces oviformis, Saccharomyces uvarum var. melibiosus, lager beer yeast, yeast
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