STRINGSTRING
YHR213W protein (Saccharomyces cerevisiae) - STRING interaction network
"YHR213W" - Possible pseudogene in Saccharomyces cerevisiae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YHR213WPossible pseudogene; has similarity to Flo1p, which is a lectin-like protein involved in flocculation (198 aa)    
Predicted Functional Partners:
YHR212W-A
Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching (67 aa)
     
   
  0.848
YAL065C
Putative protein of unknown function; has homology to FLO1; possible pseudogene (128 aa)
     
   
  0.846
YAR064W
Putative protein of unknown function (99 aa)
     
   
  0.715
YAL064W-B
Fungal-specific protein of unknown function (126 aa)
     
   
  0.603
YHR213W-A
Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching (77 aa)
           
  0.542
YAR070C
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data (99 aa)
           
  0.518
YHR210C
Putative aldose 1-epimerase superfamily protein; non-essential gene; highly expressed under anaeorbic conditions (341 aa)
           
  0.489
CNL1
Subunit of the BLOC-1 complex involved in endosomal maturation; interacts with Msb3p; null mutant is sensitive to drug inducing secretion of vacuolar cargo; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1), a complex that is involved in endosomal cargo sorting (122 aa)
           
  0.485
YHR145C
Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data (118 aa)
           
  0.485
YFL067W
Protein of unknown function, down-regulated at low calcium levels (175 aa)
     
   
  0.472
Your Current Organism:
Saccharomyces cerevisiae
NCBI taxonomy Id: 4932
Other names: Candida robusta, Pachytichospora, S. cerevisiae, Saccharomyces, Saccharomyces capensis, Saccharomyces cerevisiae, Saccharomyces italicus, Saccharomyces oviformis, Saccharomyces uvarum var. melibiosus, lager beer yeast, yeast
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