STRINGSTRING
CSS1 protein (Saccharomyces cerevisiae) - STRING interaction network
"CSS1" - Putative protein of unknown function in Saccharomyces cerevisiae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSS1Putative protein of unknown function; serine/threonine rich and highly similar to YOL155C, a putative glucan alpha-1,4-glucosidase; transcript is induced in both high and low pH environments; YIL169C is a non-essential gene (995 aa)    
Predicted Functional Partners:
HPF1
Haze-protective mannoprotein; reduces the particle size of aggregated proteins in white wines; Involved in cell wall organization and biosynthesis (967 aa)
     
   
0.912
YAR068W
Fungal-specific protein of unknown function; induced in respiratory-deficient cells (161 aa)
     
        0.887
YHR214W-A
Dubious open reading frame; induced by zinc deficiency; YHR214W-A has a paralog, YAR068W, that arose from a segmental duplication (161 aa)
     
        0.792
YDR338C
Putative protein of unknown function, member of the multi-drug and toxin extrusion (MATE) family of the multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) exporter superfamily (695 aa)
           
  0.637
YOL160W
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data (113 aa)
           
  0.579
CSS3
Soluble protein of unknown function; deletion mutants are viable and have elevated levels of Ty1 retrotransposition and Ty1 cDNA (171 aa)
           
  0.572
YEL074W
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; large scale expression analysis showed an increase in mRNA accumulation in strains mutant for exosome components (112 aa)
           
  0.540
YEL076C
Putative protein of unknown function (216 aa)
           
  0.514
YMR317W
Putative protein of unknown function with some similarity to sialidase from Trypanosoma; YMR317W is not an essential gene (1140 aa)
           
  0.483
YOR186W
Putative protein of unknown function; proper regulation of expression during heat stress is sphingolipid-dependent (144 aa)
           
  0.481
Your Current Organism:
Saccharomyces cerevisiae
NCBI taxonomy Id: 4932
Other names: Candida robusta, Pachytichospora, S. cerevisiae, Saccharomyces, Saccharomyces capensis, Saccharomyces cerevisiae, Saccharomyces italicus, Saccharomyces oviformis, Saccharomyces uvarum var. melibiosus, lager beer yeast, yeast
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