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YJL202C protein (Saccharomyces cerevisiae) - STRING interaction network
"YJL202C" - Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data in Saccharomyces cerevisiae
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
YJL202CDubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 3’ end of essential PRP21 gene encoding a subunit of the SF3a splicing factor complex (115 aa)    
Predicted Functional Partners:
BCD1
Essential protein required for the accumulation of box C/D snoRNA; Required for box C/D snoRNAs accumulation involved in snoRNA processing, snoRNA transport to the nucleolus and ribosome biogenesis (366 aa)
           
  0.642
ECM25
Non-essential protein of unknown function; promoter contains a consensus binding sequence for factor Abf1p; May be involved in cell wall organization and biogenesis (599 aa)
           
  0.578
SHQ1
Chaperone protein required for the assembly of box H/ACA snoRNPs and thus for pre-rRNA processing, forms a complex with Naf1p and interacts with H/ACA snoRNP components Nhp2p and Cbf5p; homology with known Hsp90p cochaperones; Involved in the early biogenesis steps of box H/ACA snoRNP assembly (507 aa)
           
  0.542
NAF1
RNA-binding protein required for the assembly of box H/ACA snoRNPs and thus for pre-rRNA processing, forms a complex with Shq1p and interacts with H/ACA snoRNP components Nhp2p and Cbf5p; similar to Gar1p; RNA-binding protein required for the maturation of box H/ACA snoRNPs complex and ribosome biogenesis. During assembly of the H/ACA snoRNPs complex, it associates with the complex and disappears during maturation of the complex and is replaced by GAR1 to yield mature H/ACA snoRNPs complex. Acts as a competitive binder for CBF5 probably required to prevent non-cognate RNAs from being l [...] (492 aa)
           
  0.516
SRP40
Nucleolar serine-rich protein; role in preribosome assembly or transport; may function as a chaperone of small nucleolar ribonucleoprotein particles (snoRNPs); immunologically and structurally to rat Nopp140; Not known; weak suppressor of a mutant of the subunit AC40 of DNA dependent RNA polymerase I and III (406 aa)
           
  0.483
YRA2
Member of the REF (RNA and export factor binding proteins) family; when overexpressed, can substitute for the function of Yra1p in export of poly(A)+ mRNA from the nucleus; Involved in export of poly(A) mRNAs from the nucleus. Recruited to the coding sequences as well as poly-A sites of active genes (203 aa)
           
  0.418
HTL1
Component of the RSC chromatin remodeling complex; RSC functions in transcriptional regulation and elongation, chromosome stability, and establishing sister chromatid cohesion; involved in telomere maintenance; Required for cell cycle progression through G2/M transition at temperatures higher than 33 degrees Celsius. Component of the chromatin structure-remodeling complex (RSC), which is involved in transcription regulation and nucleosome positioning. RSC is responsible for the transfer of a histone octamer from a nucleosome core particle to naked DNA. The reaction requires ATP and inv [...] (78 aa)
           
  0.414
UTP20
Component of the small-subunit (SSU) processome, which is involved in the biogenesis of the 18S rRNA; Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (2493 aa)
           
  0.412
Your Current Organism:
Saccharomyces cerevisiae
NCBI taxonomy Id: 4932
Other names: Candida robusta, Pachytichospora, S. cerevisiae, Saccharomyces, Saccharomyces capensis, Saccharomyces cerevisiae, Saccharomyces italicus, Saccharomyces oviformis, Saccharomyces uvarum var. melibiosus, lager beer yeast, yeast
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