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LSO1 protein (Saccharomyces cerevisiae) - STRING interaction network
"LSO1" - Putative protein of unknown function, originally identified as a syntenic homolog of an Ashbya gossypii gene in Saccharomyces cerevisiae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSO1Putative protein of unknown function, originally identified as a syntenic homolog of an <i>Ashbya gossypii</i> gene (93 aa)    
Predicted Functional Partners:
LSO2
Putative protein of unknown function (92 aa)
       
 
  0.927
YLR146W-A
Putative protein of unknown function (62 aa)
           
  0.679
YKL065W-A
Putative protein of unknown function (73 aa)
           
  0.679
YKL023C-A
Putative protein of unknown function (75 aa)
           
  0.679
YBR126W-B
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YBR126W-A; Identified by SAGE (47 aa)
           
  0.679
YDL007C-A
Putative protein of unknown function (85 aa)
           
  0.637
YCR024C-B
Putative protein of unknown function; identified by expression profiling and mass spectrometry (88 aa)
           
  0.626
YPR153W
Protein of unknown function (140 aa)
           
  0.579
YMR147W
Putative protein of unknown function (223 aa)
           
  0.576
AFT1
Transcription factor involved in iron utilization and homeostasis; binds the consensus site PyPuCACCCPu and activates the expression of target genes in response to changes in iron availability; Probable transcription factor that activates the genes for FRE1, FRE2 and FET3 in response to iron deprivation. Iron could interact directly with AFT1 and inhibits its activity (690 aa)
           
  0.571
Your Current Organism:
Saccharomyces cerevisiae
NCBI taxonomy Id: 4932
Other names: Candida robusta, Pachytichospora, S. cerevisiae, Saccharomyces, Saccharomyces capensis, Saccharomyces cerevisiae, Saccharomyces italicus, Saccharomyces oviformis, Saccharomyces uvarum var. melibiosus, lager beer yeast, yeast
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