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YLR339C protein (Saccharomyces cerevisiae) - STRING interaction network
"YLR339C" - Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data in Saccharomyces cerevisiae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YLR339CDubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the essential gene RPP0 (183 aa)    
Predicted Functional Partners:
YLL044W
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; transcription of both YLL044W and the overlapping gene RPL8B is reduced in the gcr1 null mutant (148 aa)
     
        0.824
YGL102C
Dubious open reading frame unlikely to encode a functional protein; overlaps 3’ end of essential RPL28 gene encoding a large subunit ribosomal protein (142 aa)
     
        0.644
YNL203C
Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data (203 aa)
           
  0.572
YLR198C
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene SIK1/YLR197W (119 aa)
     
   
  0.546
YLR230W
Dubious open reading frame unlikely to encode a functional protein; overlaps 5’ end of essential CDC42 gene which encodes a small Rho-like GTPase essential for establishment and maintenance of cell polarity (101 aa)
     
   
  0.521
YDR396W
Dubious open reading frame unlikely to encode a functional protein; extensively overlaps essential NCB2 gene encoding the beta subunit of the NC2 dimeric histone-fold complex (166 aa)
     
   
  0.517
YJL032W
Dubious open reading frame unlikely to encode a functional protein; overlaps 3’ end of essential BET4 gene encoding the alpha subunit of Type II geranylgeranyltransferase (104 aa)
           
  0.511
YDL163W
Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; partially overlaps the verified gene CDC9/YDL164C encoding DNA ligase (100 aa)
           
  0.510
YDR417C
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF RPL12B/YDR418W (123 aa)
     
        0.502
YPL142C
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF RPL33A/YPL143W, a component of the large (60S) ribosomal subunit (105 aa)
     
        0.498
Your Current Organism:
Saccharomyces cerevisiae
NCBI taxonomy Id: 4932
Other names: Candida robusta, Pachytichospora, S. cerevisiae, Saccharomyces, Saccharomyces capensis, Saccharomyces cerevisiae, Saccharomyces italicus, Saccharomyces oviformis, Saccharomyces uvarum var. melibiosus, lager beer yeast, yeast
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