Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PDR5 | YMR082C | YOR153W | YMR082C | Pleiotropic ABC efflux transporter of multiple drugs; Plasma membrane ATP-binding cassette (ABC) transporter; multidrug transporter actively regulated by Pdr1p; also involved in steroid transport, cation resistance, and cellular detoxification during exponential growth; PDR5 has a paralog, PDR15, that arose from the whole genome duplication. | Uncharacterized protein YMR082C; Putative protein of unknown function; conserved among S. cerevisiae strains; YMR082C is not an essential gene. | 0.510 |
YFR054C | YMR082C | YFR054C | YMR082C | Uncharacterized protein YFR054C; Putative protein of unknown function; conserved among S. cerevisiae strains. | Uncharacterized protein YMR082C; Putative protein of unknown function; conserved among S. cerevisiae strains; YMR082C is not an essential gene. | 0.947 |
YMR082C | PDR5 | YMR082C | YOR153W | Uncharacterized protein YMR082C; Putative protein of unknown function; conserved among S. cerevisiae strains; YMR082C is not an essential gene. | Pleiotropic ABC efflux transporter of multiple drugs; Plasma membrane ATP-binding cassette (ABC) transporter; multidrug transporter actively regulated by Pdr1p; also involved in steroid transport, cation resistance, and cellular detoxification during exponential growth; PDR5 has a paralog, PDR15, that arose from the whole genome duplication. | 0.510 |
YMR082C | YFR054C | YMR082C | YFR054C | Uncharacterized protein YMR082C; Putative protein of unknown function; conserved among S. cerevisiae strains; YMR082C is not an essential gene. | Uncharacterized protein YFR054C; Putative protein of unknown function; conserved among S. cerevisiae strains. | 0.947 |