MRPS8 protein (Saccharomyces cerevisiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Saccharomyces cerevisiae

NCBI taxonomy Id: 4932
Other names: ATCC 18824, Candida robusta, Mycoderma cerevisiae, NRRL Y-12632, S. cerevisiae, Saccharomyces capensis, Saccharomyces italicus, Saccharomyces oviformis, Saccharomyces uvarum var. melibiosus, yeast

Export your current network:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MRP4	MRPS12	YHL004W	YNR036C	Mitochondrial ribosomal protein of the small subunit.	37S ribosomal protein S12, mitochondrial; Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins; Belongs to the universal ribosomal protein uS12 family.	0.999
MRP4	MRPS16	YHL004W	YPL013C	Mitochondrial ribosomal protein of the small subunit.	Mitochondrial ribosomal protein of the small subunit.	0.999
MRP4	MRPS17	YHL004W	YMR188C	Mitochondrial ribosomal protein of the small subunit.	Mitochondrial ribosomal protein of the small subunit.	0.999
MRP4	MRPS28	YHL004W	YDR337W	Mitochondrial ribosomal protein of the small subunit.	Mitochondrial ribosomal protein of the small subunit.	0.999
MRP4	MRPS5	YHL004W	YBR251W	Mitochondrial ribosomal protein of the small subunit.	Mitochondrial ribosomal protein of the small subunit.	0.999
MRP4	MRPS8	YHL004W	YMR158W	Mitochondrial ribosomal protein of the small subunit.	Mitochondrial ribosomal protein of the small subunit.	0.999
MRP4	MRPS9	YHL004W	YBR146W	Mitochondrial ribosomal protein of the small subunit.	Mitochondrial ribosomal protein of the small subunit.	0.999
MRP4	RSM10	YHL004W	YDR041W	Mitochondrial ribosomal protein of the small subunit.	Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S10 ribosomal protein; essential for viability, unlike most other mitoribosomal proteins.	0.999
MRP4	RSM18	YHL004W	YER050C	Mitochondrial ribosomal protein of the small subunit.	Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S18 ribosomal protein.	0.999
MRP4	RSM7	YHL004W	YJR113C	Mitochondrial ribosomal protein of the small subunit.	Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S7 ribosomal protein.	0.999
MRPS12	MRP4	YNR036C	YHL004W	37S ribosomal protein S12, mitochondrial; Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins; Belongs to the universal ribosomal protein uS12 family.	Mitochondrial ribosomal protein of the small subunit.	0.999
MRPS12	MRPS16	YNR036C	YPL013C	37S ribosomal protein S12, mitochondrial; Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins; Belongs to the universal ribosomal protein uS12 family.	Mitochondrial ribosomal protein of the small subunit.	0.999
MRPS12	MRPS17	YNR036C	YMR188C	37S ribosomal protein S12, mitochondrial; Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins; Belongs to the universal ribosomal protein uS12 family.	Mitochondrial ribosomal protein of the small subunit.	0.999
MRPS12	MRPS28	YNR036C	YDR337W	37S ribosomal protein S12, mitochondrial; Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins; Belongs to the universal ribosomal protein uS12 family.	Mitochondrial ribosomal protein of the small subunit.	0.999
MRPS12	MRPS5	YNR036C	YBR251W	37S ribosomal protein S12, mitochondrial; Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins; Belongs to the universal ribosomal protein uS12 family.	Mitochondrial ribosomal protein of the small subunit.	0.999
MRPS12	MRPS8	YNR036C	YMR158W	37S ribosomal protein S12, mitochondrial; Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins; Belongs to the universal ribosomal protein uS12 family.	Mitochondrial ribosomal protein of the small subunit.	0.999
MRPS12	MRPS9	YNR036C	YBR146W	37S ribosomal protein S12, mitochondrial; Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins; Belongs to the universal ribosomal protein uS12 family.	Mitochondrial ribosomal protein of the small subunit.	0.999
MRPS12	RSM10	YNR036C	YDR041W	37S ribosomal protein S12, mitochondrial; Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins; Belongs to the universal ribosomal protein uS12 family.	Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S10 ribosomal protein; essential for viability, unlike most other mitoribosomal proteins.	0.999
MRPS12	RSM18	YNR036C	YER050C	37S ribosomal protein S12, mitochondrial; Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins; Belongs to the universal ribosomal protein uS12 family.	Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S18 ribosomal protein.	0.999
MRPS12	RSM7	YNR036C	YJR113C	37S ribosomal protein S12, mitochondrial; Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins; Belongs to the universal ribosomal protein uS12 family.	Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S7 ribosomal protein.	0.999

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