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YMR317W protein (Saccharomyces cerevisiae) - STRING interaction network
"YMR317W" - Putative protein of unknown function with some similarity to sialidase from Trypanosoma in Saccharomyces cerevisiae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
YMR317WPutative protein of unknown function with some similarity to sialidase from Trypanosoma; YMR317W is not an essential gene (1140 aa)    
Predicted Functional Partners:
PAB1
Poly(A) binding protein, part of the 3’-end RNA-processing complex, mediates interactions between the 5’ cap structure and the 3’ mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G; Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation. In the nucleus, interacts with the nuclear cleavage factor IA (CFIA), which is required for both mRNA cleavage and polyadenylation. Is also required for efficient mRNA export to the cytoplasm. Acts in [...] (577 aa)
       
      0.654
YPR197C
Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data (187 aa)
           
  0.636
YPR195C
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data (109 aa)
           
  0.636
YHR213W-A
Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching (77 aa)
           
  0.542
YAL064W-B
Fungal-specific protein of unknown function (126 aa)
           
  0.542
TIR4
Cell wall mannoprotein of the Srp1p/Tip1p family of serine-alanine-rich proteins; expressed under anaerobic conditions and required for anaerobic growth; transcription is also induced by cold shock; Component of the cell wall. Required for anaerobic growth (487 aa)
     
   
  0.539
DAN4
Cell wall mannoprotein with similarity to Tir1p, Tir2p, Tir3p, and Tir4p; expressed under anaerobic conditions, completely repressed during aerobic growth; Component of the cell wall (1161 aa)
     
   
  0.505
RTC5
Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; null mutation suppresses cdc13-1 temperature sensitivity; May be involved in a process influencing telomere capping (567 aa)
           
  0.483
CSS1
Putative protein of unknown function; serine/threonine rich and highly similar to YOL155C, a putative glucan alpha-1,4-glucosidase; transcript is induced in both high and low pH environments; YIL169C is a non-essential gene (995 aa)
           
  0.483
YGR259C
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps almost completely with the verified ORF TNA1/YGR260W (146 aa)
           
  0.457
Your Current Organism:
Saccharomyces cerevisiae
NCBI taxonomy Id: 4932
Other names: Candida robusta, Pachytichospora, S. cerevisiae, Saccharomyces, Saccharomyces capensis, Saccharomyces cerevisiae, Saccharomyces italicus, Saccharomyces oviformis, Saccharomyces uvarum var. melibiosus, lager beer yeast, yeast
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