STRINGSTRING
CSS3 protein (Saccharomyces cerevisiae) - STRING interaction network
"CSS3" - Soluble protein of unknown function in Saccharomyces cerevisiae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSS3Soluble protein of unknown function; deletion mutants are viable and have elevated levels of Ty1 retrotransposition and Ty1 cDNA (171 aa)    
Predicted Functional Partners:
YML079W
Non-essential protein of unknown function with structural resemblance to plant storage and ligand binding proteins (canavalin, glycinin, auxin binding protein) and to some enzymes (epimerase, germin); localizes to the nucleus and cytoplasm (201 aa)
           
  0.725
YPR197C
Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data (187 aa)
           
  0.700
YPR195C
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data (109 aa)
           
  0.700
CSS1
Putative protein of unknown function; serine/threonine rich and highly similar to YOL155C, a putative glucan alpha-1,4-glucosidase; transcript is induced in both high and low pH environments; YIL169C is a non-essential gene (995 aa)
           
  0.572
YNL018C
Putative protein of unknown function (612 aa)
           
  0.540
YDR250C
Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data (91 aa)
           
  0.540
YOR385W
Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YOR385W is not an essential gene (290 aa)
           
  0.516
YML122C
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data (126 aa)
           
  0.511
ENB1
Endosomal ferric enterobactin transporter, expressed under conditions of iron deprivation; member of the major facilitator superfamily; expression is regulated by Rcs1p and affected by chloroquine treatment; Involved in the transport of siderophore enterobactin and so has a role in iron homeostasis (606 aa)
     
        0.495
YNL150W
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; extensive overlap with PGA2/YNL149C, an uncharacterized gene with a proposed role in protein trafficking (135 aa)
           
  0.487
Your Current Organism:
Saccharomyces cerevisiae
NCBI taxonomy Id: 4932
Other names: Candida robusta, Pachytichospora, S. cerevisiae, Saccharomyces, Saccharomyces capensis, Saccharomyces cerevisiae, Saccharomyces italicus, Saccharomyces oviformis, Saccharomyces uvarum var. melibiosus, lager beer yeast, yeast
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