Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CMC4 | EFM3 | YMR194C-B | YJR129C | Cx9C motif-containing protein 4, mitochondrial; Protein that localizes to the mitochondrial intermembrane space; localizes via the Mia40p-Erv1p system; contains twin cysteine-x(9)-cysteine motifs; Belongs to the CMC4 family. | Protein-lysine N-methyltransferase EFM3; S-adenosylmethionine-dependent methyltransferase; seven-beta-strand lysine methyltransferase which trimethylates translation elongation factor EF2 (Eft1p and Eft2p) at lysine 509; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; ortholog of human gene FAM86A; Belongs to the class I-like SAM-binding methyltransferase superfamily. EEF2KMT family. | 0.610 |
| CMC4 | YPL222C-A | YMR194C-B | YPL222C-A | Cx9C motif-containing protein 4, mitochondrial; Protein that localizes to the mitochondrial intermembrane space; localizes via the Mia40p-Erv1p system; contains twin cysteine-x(9)-cysteine motifs; Belongs to the CMC4 family. | Putative uncharacterized protein YPL222C-A; Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching. | 0.556 |
| EFM3 | CMC4 | YJR129C | YMR194C-B | Protein-lysine N-methyltransferase EFM3; S-adenosylmethionine-dependent methyltransferase; seven-beta-strand lysine methyltransferase which trimethylates translation elongation factor EF2 (Eft1p and Eft2p) at lysine 509; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; ortholog of human gene FAM86A; Belongs to the class I-like SAM-binding methyltransferase superfamily. EEF2KMT family. | Cx9C motif-containing protein 4, mitochondrial; Protein that localizes to the mitochondrial intermembrane space; localizes via the Mia40p-Erv1p system; contains twin cysteine-x(9)-cysteine motifs; Belongs to the CMC4 family. | 0.610 |
| EFM3 | YPL222C-A | YJR129C | YPL222C-A | Protein-lysine N-methyltransferase EFM3; S-adenosylmethionine-dependent methyltransferase; seven-beta-strand lysine methyltransferase which trimethylates translation elongation factor EF2 (Eft1p and Eft2p) at lysine 509; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; ortholog of human gene FAM86A; Belongs to the class I-like SAM-binding methyltransferase superfamily. EEF2KMT family. | Putative uncharacterized protein YPL222C-A; Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching. | 0.423 |
| FMP40 | YPL222C-A | YPL222W | YPL222C-A | Protein adenylyltransferase SelO, mitochondrial; Putative protein of unknown function; proposed to be involved in responding to environmental stresses; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies. | Putative uncharacterized protein YPL222C-A; Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching. | 0.804 |
| HRP1 | SER3 | YOL123W | YER081W | Nuclear polyadenylated RNA-binding protein 4; Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability. | D-3-phosphoglycerate dehydrogenase 1; 3-phosphoglycerate dehydrogenase and alpha-ketoglutarate reductase; 3PG dehydrogenase that catalyzes the first step in serine and glycine biosynthesis; also functions as an alpha-ketoglutarate reductase, converting alpha-ketoglutarate to D-2-hydroxyglutarate (D-2HG); localizes to the cytoplasm; SER3 has a paralog, SER33, that arose from the whole genome duplication. | 0.494 |
| HRP1 | YPL222C-A | YOL123W | YPL222C-A | Nuclear polyadenylated RNA-binding protein 4; Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability. | Putative uncharacterized protein YPL222C-A; Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching. | 0.519 |
| SER3 | HRP1 | YER081W | YOL123W | D-3-phosphoglycerate dehydrogenase 1; 3-phosphoglycerate dehydrogenase and alpha-ketoglutarate reductase; 3PG dehydrogenase that catalyzes the first step in serine and glycine biosynthesis; also functions as an alpha-ketoglutarate reductase, converting alpha-ketoglutarate to D-2-hydroxyglutarate (D-2HG); localizes to the cytoplasm; SER3 has a paralog, SER33, that arose from the whole genome duplication. | Nuclear polyadenylated RNA-binding protein 4; Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability. | 0.494 |
| SER3 | YPL222C-A | YER081W | YPL222C-A | D-3-phosphoglycerate dehydrogenase 1; 3-phosphoglycerate dehydrogenase and alpha-ketoglutarate reductase; 3PG dehydrogenase that catalyzes the first step in serine and glycine biosynthesis; also functions as an alpha-ketoglutarate reductase, converting alpha-ketoglutarate to D-2-hydroxyglutarate (D-2HG); localizes to the cytoplasm; SER3 has a paralog, SER33, that arose from the whole genome duplication. | Putative uncharacterized protein YPL222C-A; Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching. | 0.418 |
| YPL222C-A | CMC4 | YPL222C-A | YMR194C-B | Putative uncharacterized protein YPL222C-A; Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching. | Cx9C motif-containing protein 4, mitochondrial; Protein that localizes to the mitochondrial intermembrane space; localizes via the Mia40p-Erv1p system; contains twin cysteine-x(9)-cysteine motifs; Belongs to the CMC4 family. | 0.556 |
| YPL222C-A | EFM3 | YPL222C-A | YJR129C | Putative uncharacterized protein YPL222C-A; Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching. | Protein-lysine N-methyltransferase EFM3; S-adenosylmethionine-dependent methyltransferase; seven-beta-strand lysine methyltransferase which trimethylates translation elongation factor EF2 (Eft1p and Eft2p) at lysine 509; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; ortholog of human gene FAM86A; Belongs to the class I-like SAM-binding methyltransferase superfamily. EEF2KMT family. | 0.423 |
| YPL222C-A | FMP40 | YPL222C-A | YPL222W | Putative uncharacterized protein YPL222C-A; Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching. | Protein adenylyltransferase SelO, mitochondrial; Putative protein of unknown function; proposed to be involved in responding to environmental stresses; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies. | 0.804 |
| YPL222C-A | HRP1 | YPL222C-A | YOL123W | Putative uncharacterized protein YPL222C-A; Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching. | Nuclear polyadenylated RNA-binding protein 4; Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability. | 0.519 |
| YPL222C-A | SER3 | YPL222C-A | YER081W | Putative uncharacterized protein YPL222C-A; Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching. | D-3-phosphoglycerate dehydrogenase 1; 3-phosphoglycerate dehydrogenase and alpha-ketoglutarate reductase; 3PG dehydrogenase that catalyzes the first step in serine and glycine biosynthesis; also functions as an alpha-ketoglutarate reductase, converting alpha-ketoglutarate to D-2-hydroxyglutarate (D-2HG); localizes to the cytoplasm; SER3 has a paralog, SER33, that arose from the whole genome duplication. | 0.418 |