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RPC40 protein (Saccharomyces cerevisiae) - STRING interaction network
"RPC40" - RNA polymerase subunit AC40 in Saccharomyces cerevisiae
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
RPC40RNA polymerase subunit AC40; common to RNA polymerase I and III; predominant determinant targeting Ty1 integration upstream of Pol III-transcribed genes (335 aa)    
Predicted Functional Partners:
RPC19
RNA polymerase subunit AC19; common to RNA polymerases I and III (142 aa)
     
  0.999
RPA43
RNA polymerase I subunit A43; Belongs to the eukaryotic RPA43 RNA polymerase subunit family (326 aa)
     
  0.999
RET1
Second-largest subunit of RNA polymerase III; RNA polymerase III is responsible for the transcription of tRNA and 5S RNA genes, and other low molecular weight RNAs (1149 aa)
 
  0.999
RPA135
RNA polymerase I second largest subunit A135 (1203 aa)
 
  0.999
RPO26
RNA polymerase subunit ABC23; common to RNA polymerases I, II, and III; part of central core; similar to bacterial omega subunit; Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family (155 aa)
   
  0.999
RPB8
RNA polymerase subunit ABC14.5; common to RNA polymerases I, II, and III (146 aa)
     
  0.999
RPA49
RNA polymerase I subunit A49; essential for nucleolar assembly and for high polymerase loading rate; required for nucleolar localization of Rpa34p (415 aa)
     
  0.999
RPA12
RNA polymerase I subunit A12.2; contains two zinc binding domains, and the N terminal domain is responsible for anchoring to the RNA pol I complex; physically interacts with transcriptional activator Msn4p, to regulate transcription of AYR1, a gene involved in lipid metabolism; Belongs to the archaeal RpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family (125 aa)
     
  0.999
RPB5
RNA polymerase subunit ABC27; common to RNA polymerases I, II, and III; contacts DNA and affects transactivation; Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family (215 aa)
   
  0.999
RPB10
RNA polymerase subunit ABC10-beta; common to RNA polymerases I, II, and III (70 aa)
   
  0.999
Your Current Organism:
Saccharomyces cerevisiae
NCBI taxonomy Id: 4932
Other names: ATCC 18824, Candida robusta, NRRL Y-12632, S. cerevisiae, Saccharomyces capensis, Saccharomyces cerevisiae, Saccharomyces italicus, Saccharomyces oviformis, Saccharomyces uvarum var. melibiosus, lager beer yeast, yeast
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