Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GARC_0401 | GARC_0584 | GARC_0401 | GARC_0584 | Hypothetical protein. | Hypothetical protein. | 0.615 |
GARC_0584 | GARC_0401 | GARC_0584 | GARC_0401 | Hypothetical protein. | Hypothetical protein. | 0.615 |
GARC_0584 | GARC_0585 | GARC_0584 | GARC_0585 | Hypothetical protein. | Hypothetical protein. | 0.689 |
GARC_0584 | GARC_1552 | GARC_0584 | GARC_1552 | Hypothetical protein. | Hypothetical protein. | 0.560 |
GARC_0584 | GARC_1835 | GARC_0584 | GARC_1835 | Hypothetical protein. | Hypothetical protein. | 0.488 |
GARC_0584 | GARC_2979 | GARC_0584 | GARC_2979 | Hypothetical protein. | Hypothetical protein. | 0.615 |
GARC_0584 | GARC_4094 | GARC_0584 | GARC_4094 | Hypothetical protein. | Hypothetical protein. | 0.608 |
GARC_0584 | GARC_4797 | GARC_0584 | GARC_4797 | Hypothetical protein. | Hypothetical protein. | 0.523 |
GARC_0584 | ligA | GARC_0584 | GARC_0583 | Hypothetical protein. | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.801 |
GARC_0584 | smc | GARC_0584 | GARC_0581 | Hypothetical protein. | Chromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.587 |
GARC_0584 | zipA | GARC_0584 | GARC_0582 | Hypothetical protein. | Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. | 0.605 |
GARC_0585 | GARC_0584 | GARC_0585 | GARC_0584 | Hypothetical protein. | Hypothetical protein. | 0.689 |
GARC_0585 | ligA | GARC_0585 | GARC_0583 | Hypothetical protein. | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.689 |
GARC_0585 | zipA | GARC_0585 | GARC_0582 | Hypothetical protein. | Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. | 0.492 |
GARC_1552 | GARC_0584 | GARC_1552 | GARC_0584 | Hypothetical protein. | Hypothetical protein. | 0.560 |
GARC_1552 | GARC_1835 | GARC_1552 | GARC_1835 | Hypothetical protein. | Hypothetical protein. | 0.445 |
GARC_1835 | GARC_0584 | GARC_1835 | GARC_0584 | Hypothetical protein. | Hypothetical protein. | 0.488 |
GARC_1835 | GARC_1552 | GARC_1835 | GARC_1552 | Hypothetical protein. | Hypothetical protein. | 0.445 |
GARC_1835 | GARC_2979 | GARC_1835 | GARC_2979 | Hypothetical protein. | Hypothetical protein. | 0.414 |
GARC_1835 | GARC_4094 | GARC_1835 | GARC_4094 | Hypothetical protein. | Hypothetical protein. | 0.456 |
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