Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GARC_1985HlyD family secretion protein. (305 aa)    
Predicted Functional Partners:
GARC_1986
Glycolipid ABC exporter (DevE) family, permease protein.
 
    0.949
GARC_1984
Lysophospholipid hydrolase.
 
  
 0.840
GARC_3530
Membrane fusion efflux protein, putative; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.820
tolC
Outer membrane channel protein TolC.
  
 0.791
GARC_1642
TolC family type I secretion outer membrane protein.
  
  0.773
GARC_3721
Outer membrane efflux protein.
  
  0.773
GARC_1987
Hypothetical protein.
 
    0.772
GARC_2947
Outer membrane efflux protein.
   
  0.772
GARC_0332
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.759
GARC_2125
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.690
Your Current Organism:
Paraglaciecola arctica
NCBI taxonomy Id: 493475
Other names: Glaciecola arctica BSs20135, Glaciecola arctica str. BSs20135, Glaciecola arctica strain BSs20135, Glaciecola sp. BSs20135, P. arctica BSs20135, Paraglaciecola arctica BSs20135
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.