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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fprferredoxin--NADP+ reductase. (248 aa)    
Predicted Functional Partners:
fpr-2
ferredoxin--NADP+ reductase.
  
  
 
0.872
GARC_1999
Hypothetical protein.
       0.634
adhA
Alcohol dehydrogenase [cytochrome c].
   
 
  0.625
GARC_3279
Hypothetical protein.
 
 
 0.542
GARC_1998
Hypothetical protein.
       0.464
GARC_1997
Predicted hydrolase of the alpha/beta superfamily protein.
 
     0.456
fre
NAD(P)H-flavin reductase.
  
  
 0.450
antA
Anthranilate 1,2-dioxygenase (deaminating, decarboxylating) large subunit.
  
 
 0.444
nirD
Nitrite reductase (NAD(P)H) small subunit.
   
 
 0.435
desC
Delta-9 desaturase.
     
 0.423
Your Current Organism:
Paraglaciecola arctica
NCBI taxonomy Id: 493475
Other names: Glaciecola arctica BSs20135, Glaciecola arctica str. BSs20135, Glaciecola arctica strain BSs20135, Glaciecola sp. BSs20135, P. arctica BSs20135, Paraglaciecola arctica BSs20135
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