STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GARC_2325Two-component system, LytT family, response regulator. (273 aa)    
Predicted Functional Partners:
yesM
Two-component system, sensor histidine kinase YesM.
 
 0.960
GARC_0680
Two-component system, LytT family, sensor kinase.
 
 0.867
GARC_1542
Signal transduction histidine kinase, LytS.
 
 0.867
GARC_1751
Hypothetical protein.
 
 0.867
GARC_0641
Hypothetical protein.
 
 0.861
GARC_1285
Hypothetical protein.
 
 0.858
GARC_2731
Hypothetical protein.
 
 
 0.855
GARC_4203
Response regulator receiver protein.
  
     0.744
GARC_3499
Hypothetical protein.
 
  
0.630
GARC_4309
Hypothetical protein.
    
 0.588
Your Current Organism:
Paraglaciecola arctica
NCBI taxonomy Id: 493475
Other names: Glaciecola arctica BSs20135, Glaciecola arctica str. BSs20135, Glaciecola arctica strain BSs20135, Glaciecola sp. BSs20135, P. arctica BSs20135, Paraglaciecola arctica BSs20135
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.