Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
GARC_2467Peptide ABC transporter permease. (410 aa)    
Predicted Functional Partners:
ftsE
Cell division transport system ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
  
 
 0.965
GARC_2468
ABC-type antimicrobial peptide transport system ATPase component.
 
     0.944
GARC_3299
Peptidase M23B.
   
 
 0.819
GARC_4107
Hypothetical protein.
  
   
 0.779
GARC_3038
Lipoprotein, putative.
  
     0.774
GARC_4115
Hypothetical protein.
  
     0.774
GARC_4116
Hypothetical protein.
  
     0.774
zipA
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
    
 
 0.754
lolD-3
Lipoprotein-releasing system ATP-binding protein LolD.
 
     0.726
GARC_1962
Hypothetical protein.
   
 
 0.669
Your Current Organism:
Paraglaciecola arctica
NCBI taxonomy Id: 493475
Other names: Glaciecola arctica BSs20135, Glaciecola arctica str. BSs20135, Glaciecola arctica strain BSs20135, Glaciecola sp. BSs20135, P. arctica BSs20135, Paraglaciecola arctica BSs20135
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