STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GARC_2714Ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family. (545 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase (NADPH/NADH) large chain.
 
0.998
gltD-2
Glutamate synthase (NADPH/NADH) small chain.
 0.991
GARC_0090
NADH oxidase.
  
 0.972
fadH
2,4-dienoyl-CoA reductase; NADPH2.
  
 0.972
fadH-2
2,4-dienoyl-CoA reductase; NADPH2.
  
 0.972
gltD
Glutamate synthase (NADPH/NADH) small chain.
 
 0.954
ldh
Leucine dehydrogenase.
  
 0.942
gdh
Glutamate dehydrogenase; NADP+; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.942
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 0.892
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.892
Your Current Organism:
Paraglaciecola arctica
NCBI taxonomy Id: 493475
Other names: Glaciecola arctica BSs20135, Glaciecola arctica str. BSs20135, Glaciecola arctica strain BSs20135, Glaciecola sp. BSs20135, P. arctica BSs20135, Paraglaciecola arctica BSs20135
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