STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qseBTranscriptional regulatory protein qseB. (224 aa)    
Predicted Functional Partners:
GARC_3204
Hypothetical protein.
 
 0.973
GARC_4309
Hypothetical protein.
 
 0.969
GARC_4156
Sensor histidine kinase; With multiple PAS/PAC and a response regulator receiver domain.
 
 0.961
arcB
Two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB.
 
 0.953
barA
Signal transduction histidine-protein kinase BarA.
 
 0.952
GARC_2384
Hpt sensor hybrid histidine kinase.
 
 0.897
GARC_1625
Hypothetical protein.
 
 0.894
GARC_2751
Two-component system, OmpR family, sensor kinase.
 
 0.880
qseC
Two-component system, OmpR family, sensor histidine kinase QseC.
 
 0.877
GARC_3069
Hypothetical protein.
 
 0.870
Your Current Organism:
Paraglaciecola arctica
NCBI taxonomy Id: 493475
Other names: Glaciecola arctica BSs20135, Glaciecola arctica str. BSs20135, Glaciecola arctica strain BSs20135, Glaciecola sp. BSs20135, P. arctica BSs20135, Paraglaciecola arctica BSs20135
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.