Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GARC_0769 | GARC_1268 | GARC_0769 | GARC_1268 | Hypothetical protein; Belongs to the glycosyl hydrolase 31 family. | Hexosaminidase. | 0.461 |
GARC_0769 | manB-2 | GARC_0769 | GARC_3400 | Hypothetical protein; Belongs to the glycosyl hydrolase 31 family. | Beta-mannosidase. | 0.591 |
GARC_1268 | GARC_0769 | GARC_1268 | GARC_0769 | Hexosaminidase. | Hypothetical protein; Belongs to the glycosyl hydrolase 31 family. | 0.461 |
GARC_1268 | GARC_3387 | GARC_1268 | GARC_3387 | Hexosaminidase. | Hypothetical protein. | 0.579 |
GARC_1268 | GARC_3388 | GARC_1268 | GARC_3388 | Hexosaminidase. | Hypothetical protein. | 0.597 |
GARC_1268 | GARC_3398 | GARC_1268 | GARC_3398 | Hexosaminidase. | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. | 0.422 |
GARC_1268 | GARC_3401 | GARC_1268 | GARC_3401 | Hexosaminidase. | Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.480 |
GARC_1268 | GARC_3402 | GARC_1268 | GARC_3402 | Hexosaminidase. | Hypothetical protein. | 0.594 |
GARC_1268 | cutC | GARC_1268 | GARC_3399 | Hexosaminidase. | Copper homeostasis protein; Belongs to the CutC family. | 0.583 |
GARC_1268 | manB-2 | GARC_1268 | GARC_3400 | Hexosaminidase. | Beta-mannosidase. | 0.712 |
GARC_3387 | GARC_1268 | GARC_3387 | GARC_1268 | Hypothetical protein. | Hexosaminidase. | 0.579 |
GARC_3387 | GARC_3388 | GARC_3387 | GARC_3388 | Hypothetical protein. | Hypothetical protein. | 0.805 |
GARC_3387 | GARC_3398 | GARC_3387 | GARC_3398 | Hypothetical protein. | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. | 0.450 |
GARC_3387 | GARC_3401 | GARC_3387 | GARC_3401 | Hypothetical protein. | Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.583 |
GARC_3387 | cutC | GARC_3387 | GARC_3399 | Hypothetical protein. | Copper homeostasis protein; Belongs to the CutC family. | 0.423 |
GARC_3387 | manB-2 | GARC_3387 | GARC_3400 | Hypothetical protein. | Beta-mannosidase. | 0.605 |
GARC_3388 | GARC_1268 | GARC_3388 | GARC_1268 | Hypothetical protein. | Hexosaminidase. | 0.597 |
GARC_3388 | GARC_3387 | GARC_3388 | GARC_3387 | Hypothetical protein. | Hypothetical protein. | 0.805 |
GARC_3388 | GARC_3397 | GARC_3388 | GARC_3397 | Hypothetical protein. | N4-(beta-N-acetylglucosaminyl)-L-asparaginase. | 0.406 |
GARC_3388 | GARC_3398 | GARC_3388 | GARC_3398 | Hypothetical protein. | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. | 0.415 |
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