STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GARC_3441Hypothetical protein. (353 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.842
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
       0.695
lolE
Lipoprotein-releasing system transmembrane protein lolC.
       0.695
ydeP
Protein ydeP; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.638
ybeY
Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.403
GARC_4037
Propeptide, PepSY amd peptidase M4.
   
    0.402
Your Current Organism:
Paraglaciecola arctica
NCBI taxonomy Id: 493475
Other names: Glaciecola arctica BSs20135, Glaciecola arctica str. BSs20135, Glaciecola arctica strain BSs20135, Glaciecola sp. BSs20135, P. arctica BSs20135, Paraglaciecola arctica BSs20135
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.