STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GARC_3945Possible acetyltransferase. (153 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.658
GARC_3944
Hypothetical protein.
  
    0.648
GARC_2903
Hypothetical protein.
  
     0.615
GARC_0688
Membrane protein.
  
     0.569
GARC_3509
Hypothetical protein.
  
     0.513
GARC_4287
Hypothetical protein.
  
     0.457
GARC_4257
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD.
  
     0.426
GARC_3943
Acyltransferase domain protein.
       0.425
GARC_4463
Hypothetical protein.
  
     0.425
GARC_0182
Hypothetical protein.
  
     0.410
Your Current Organism:
Paraglaciecola arctica
NCBI taxonomy Id: 493475
Other names: Glaciecola arctica BSs20135, Glaciecola arctica str. BSs20135, Glaciecola arctica strain BSs20135, Glaciecola sp. BSs20135, P. arctica BSs20135, Paraglaciecola arctica BSs20135
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.