Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GARC_0297 | GARC_2807 | GARC_0297 | GARC_2807 | MscS mechanosensitive ion channel. | Hypothetical protein. | 0.643 |
GARC_0297 | GARC_4214 | GARC_0297 | GARC_4214 | MscS mechanosensitive ion channel. | Hypothetical protein. | 0.649 |
GARC_0756 | GARC_1994 | GARC_0756 | GARC_1994 | Hypothetical protein. | Hypothetical protein. | 0.577 |
GARC_0756 | GARC_4214 | GARC_0756 | GARC_4214 | Hypothetical protein. | Hypothetical protein. | 0.573 |
GARC_1602 | GARC_4214 | GARC_1602 | GARC_4214 | TonB-dependent receptor. | Hypothetical protein. | 0.676 |
GARC_1602 | GARC_4846 | GARC_1602 | GARC_4846 | TonB-dependent receptor. | Hypothetical protein. | 0.470 |
GARC_1994 | GARC_0756 | GARC_1994 | GARC_0756 | Hypothetical protein. | Hypothetical protein. | 0.577 |
GARC_1994 | GARC_4214 | GARC_1994 | GARC_4214 | Hypothetical protein. | Hypothetical protein. | 0.495 |
GARC_1994 | GARC_4846 | GARC_1994 | GARC_4846 | Hypothetical protein. | Hypothetical protein. | 0.540 |
GARC_2472 | GARC_2807 | GARC_2472 | GARC_2807 | Hypothetical protein. | Hypothetical protein. | 0.514 |
GARC_2472 | GARC_4214 | GARC_2472 | GARC_4214 | Hypothetical protein. | Hypothetical protein. | 0.539 |
GARC_2472 | dnaC | GARC_2472 | GARC_0059 | Hypothetical protein. | DNA replication protein DnaC. | 0.773 |
GARC_2807 | GARC_0297 | GARC_2807 | GARC_0297 | Hypothetical protein. | MscS mechanosensitive ion channel. | 0.643 |
GARC_2807 | GARC_2472 | GARC_2807 | GARC_2472 | Hypothetical protein. | Hypothetical protein. | 0.514 |
GARC_2807 | GARC_4214 | GARC_2807 | GARC_4214 | Hypothetical protein. | Hypothetical protein. | 0.552 |
GARC_2807 | GARC_5289 | GARC_2807 | GARC_5289 | Hypothetical protein. | Hypothetical protein. | 0.645 |
GARC_2807 | dnaC | GARC_2807 | GARC_0059 | Hypothetical protein. | DNA replication protein DnaC. | 0.513 |
GARC_4214 | GARC_0297 | GARC_4214 | GARC_0297 | Hypothetical protein. | MscS mechanosensitive ion channel. | 0.649 |
GARC_4214 | GARC_0756 | GARC_4214 | GARC_0756 | Hypothetical protein. | Hypothetical protein. | 0.573 |
GARC_4214 | GARC_1602 | GARC_4214 | GARC_1602 | Hypothetical protein. | TonB-dependent receptor. | 0.676 |
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