Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GARC_4520 | GARC_4523 | GARC_4520 | GARC_4523 | yecA family protein; Belongs to the UPF0149 family. | Hypothetical protein. | 0.451 |
GARC_4520 | pepP | GARC_4520 | GARC_4521 | yecA family protein; Belongs to the UPF0149 family. | Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. | 0.708 |
GARC_4520 | visC-2 | GARC_4520 | GARC_4522 | yecA family protein; Belongs to the UPF0149 family. | Protein visC. | 0.704 |
GARC_4520 | ybaK | GARC_4520 | GARC_4524 | yecA family protein; Belongs to the UPF0149 family. | Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase ybaK; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | 0.448 |
GARC_4523 | GARC_4520 | GARC_4523 | GARC_4520 | Hypothetical protein. | yecA family protein; Belongs to the UPF0149 family. | 0.451 |
GARC_4523 | GARC_4526 | GARC_4523 | GARC_4526 | Hypothetical protein. | Hypothetical protein. | 0.475 |
GARC_4523 | pepP | GARC_4523 | GARC_4521 | Hypothetical protein. | Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. | 0.601 |
GARC_4523 | visC-2 | GARC_4523 | GARC_4522 | Hypothetical protein. | Protein visC. | 0.601 |
GARC_4523 | ybaK | GARC_4523 | GARC_4524 | Hypothetical protein. | Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase ybaK; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | 0.768 |
GARC_4526 | GARC_4523 | GARC_4526 | GARC_4523 | Hypothetical protein. | Hypothetical protein. | 0.475 |
GARC_4526 | ybaK | GARC_4526 | GARC_4524 | Hypothetical protein. | Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase ybaK; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | 0.487 |
pepP | GARC_4520 | GARC_4521 | GARC_4520 | Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. | yecA family protein; Belongs to the UPF0149 family. | 0.708 |
pepP | GARC_4523 | GARC_4521 | GARC_4523 | Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. | Hypothetical protein. | 0.601 |
pepP | visC-2 | GARC_4521 | GARC_4522 | Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. | Protein visC. | 0.821 |
pepP | ybaK | GARC_4521 | GARC_4524 | Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. | Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase ybaK; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | 0.596 |
visC-2 | GARC_4520 | GARC_4522 | GARC_4520 | Protein visC. | yecA family protein; Belongs to the UPF0149 family. | 0.704 |
visC-2 | GARC_4523 | GARC_4522 | GARC_4523 | Protein visC. | Hypothetical protein. | 0.601 |
visC-2 | pepP | GARC_4522 | GARC_4521 | Protein visC. | Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. | 0.821 |
visC-2 | ybaK | GARC_4522 | GARC_4524 | Protein visC. | Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase ybaK; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | 0.596 |
ybaK | GARC_4520 | GARC_4524 | GARC_4520 | Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase ybaK; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | yecA family protein; Belongs to the UPF0149 family. | 0.448 |
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